Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887828.1_cds_XP_016442311.1_37586
CDS Infomation

[gene=LOC107767737] [db_xref=GeneID:107767737] [protein=golgin candidate 4-like isoform X2] [protein_id=XP_016442311.1] [location=complement(join(10898..11236,11936..12112,12509..12563,13316..13518,15603..15668,15818..16114,17774..17917,18042..18119,18316..18483,19201..19265,19349..19487,20405..20536,20967..21059,23186..23284,25330..25548))] [gbkey=CDS]
Sequence

ATGTGGAGTTCAATTGAGAATTTTAAGGAGAATCTCAATAGGATCGCTCTTGAAATTCAC
GATGACGACGAAGAAGAGCTTTCGGTTTACAGTTCAGGTGATCCACCGGAGAATAATTCG
TTATCTGATCGGAGAATTTCTAGAAGTTTCGGTCGTTCCAAGTCGCCGACATATCATTCC
CCAATTGCCAATGGTTTCGGTTCTGCTCACAACCCAGAGATAGAGAAATACAAAATTGAA
ATTAAGAGACTTAAAGAATCTGAGGCTGAAATCAAGGCACTGTCAGTTAATTATGCAGCT
TTATTGATAGAAAAAGAGGATCAAATTTCAAGGTTAAATGAAGAAAATGGATCATTGAAG
CAAAGTCTACAATCGAGTTCTCCCTTGAGTGCATCTAGAAACATGCATAAGGGGAGCAAT
GATCAATCTCCAAACCGCCAAAGTAAAGCTATAGCTAACCGTTCCTTTGGAAGCCGAGCA
AACAATGGGTTTTCTCTGAAGCAGGATGGACTAAGCAATGGAACCAGTTTTGGCAATGAA
AAGGAGCTTGCCGACTTGCCGGAAGAGAAAAATAAATCCCTGTCAGCTATACAGGCATCT
CATGAGTTGCAGTTAAAACAACTGGAAATGGAGCTTAATAAAGAACGGACCGAGCTGGCA
AATATGCAAACTAGGTTACAAGAGGAGCAGAAGCTGAGCTCGACTTTCCAACAAGAGCTG
AACTCTTTAAAAGTAGACAAGGATAAAATGGCTGTGGAGATGACAAATATTCGTGCTGAG
CTGTCTCATAAAGTATCTGAATTAAAACAGTTGCAAATGGAGCTTCATGAAAGAGATAAC
GATGAATCAAATGAAGCAATAGATGGTTTGAGAAGAGTTATAGAAACACTGCAGAAAGAA
AACAGTAATCTTAAGAATGAGAAAGATAAATTAGAAGCTTCAGCAGCTGGCGTATCTTTA
GCTGATAGAAGTAACATCAATGGTATAACTGAGGTGCATCCTTTGGAGGTATTTCCTGAA
AAGGAAGAAATGAAGAGGTCGTTACAAAATGTGGAGAATGAATTGAAGGAAACACGCCGG
GAAAGGGACAAAGCACTGCAAGAACTAAAACGCCTTAAGCAGCATTTACTTGAGAAGGAA
ATGGAAGAATCAGAAAAGATGGATGAGGACAGCCAAATAATTGAAGAGCTACGTCAAAAT
AACGAATATCAGCGAGCTCAAATAATGCAGTTGGAGAAAGCTCTTAAGCAAGCAATTGCA
AGTCAAGAAGATGTCAAAACCCTTAATGATAATGAATTAAAGAAGTCGAAGGATACAGTC
AATGAGCTAAATAAAAAACTAGCCAACTGTTTGAGCACAATAGAAGCCCAAAATGTTGAA
GTCCTTAACCTACAAACTGCACTTGGCCAATACTATGCCGAGATTGAAGCCAAGGAACGC
CTTGGAGAAGAATTGGCAGTGGCAAAGGAGGAATCGCATAAACTTTCAGGGCTTTTGAAG
GATGCTTACAATGAGTCGGAAACATTCAAGAAGGAGAAAGAAGAGGTGTTGGTGAAACTT
TCAGACATGGAGAGAAGACTTTCTGAAGGGAAGGGCCGTATAAATAAGCTTGAGCAAGAC
AATGAAAAGCTACGACGAGCTCTTGAACAGAGCATGACCAGGCTGAATAGGATGTCACTG
GATTCTGATAATTATGTTGACAGGCGGATTGTGATCAAGTTACTGGTGACTTACTTCCAA
AGGAATCACAGCAAAGAGGTTTTGGATCTTATGGTCCGTATGTTAGGATTCTCTGATGAA
GATAAGCAGAGGATAGGCATGGCTCAACAAGGATCTGGTAAAGGTGTCGTCCGGGGTGTC
TTGGGTCTCCCTGGACGACTAGTAGGTGGCATCTTGGGTGGAAGTTCAGCACCTTCTAGT
ACGGCATCTGATCAGTCCTTTGCAGATCTCTGGGTTGATTTTCTTCTTAAAGAGACAGAA
AGAGAGAAAAGGGAGGCTGCTGAAGCTGGCAACGGAACTGCAGGAGATCAAATCAAGGGA
TTTCAGGAGGCAATGGGTGCAGATGAAACCATGGCAGAACATAGGTCACATAGTTCTGAT
GTTTCCTTTATTTCCTCGAGACAACAATCTTCTCCTAAGCATAACCTACCCCCTTTGGCA
CCACATTCACGGCAAGTTATCTTGCCCCCTGAGCATTCTGATGCCGAGTTCTCAACAGTA
CCTCTTACCCCATTGGAAACCAATTATCAGATTTCAAGACTACCTAGATACTGA

Peptide Sequence

PEP ID

XP_016442311.1
PEP Infomation

PREDICTED: golgin candidate 4-like isoform X2 [Nicotiana tabacum]
Sequence

MWSSIENFKENLNRIALEIHDDDEEELSVYSSGDPPENNSLSDRRISRSFGRSKSPTYHS
PIANGFGSAHNPEIEKYKIEIKRLKESEAEIKALSVNYAALLIEKEDQISRLNEENGSLK
QSLQSSSPLSASRNMHKGSNDQSPNRQSKAIANRSFGSRANNGFSLKQDGLSNGTSFGNE
KELADLPEEKNKSLSAIQASHELQLKQLEMELNKERTELANMQTRLQEEQKLSSTFQQEL
NSLKVDKDKMAVEMTNIRAELSHKVSELKQLQMELHERDNDESNEAIDGLRRVIETLQKE
NSNLKNEKDKLEASAAGVSLADRSNINGITEVHPLEVFPEKEEMKRSLQNVENELKETRR
ERDKALQELKRLKQHLLEKEMEESEKMDEDSQIIEELRQNNEYQRAQIMQLEKALKQAIA
SQEDVKTLNDNELKKSKDTVNELNKKLANCLSTIEAQNVEVLNLQTALGQYYAEIEAKER
LGEELAVAKEESHKLSGLLKDAYNESETFKKEKEEVLVKLSDMERRLSEGKGRINKLEQD
NEKLRRALEQSMTRLNRMSLDSDNYVDRRIVIKLLVTYFQRNHSKEVLDLMVRMLGFSDE
DKQRIGMAQQGSGKGVVRGVLGLPGRLVGGILGGSSAPSSTASDQSFADLWVDFLLKETE
REKREAAEAGNGTAGDQIKGFQEAMGADETMAEHRSHSSDVSFISSRQQSSPKHNLPPLA
PHSRQVILPPEHSDAEFSTVPLTPLETNYQISRLPRY

Transcript Sequence

Gene sequence data has not been registered.